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DRP-VEM: Drug repositioning using voting ensemble model
Conventional approaches to drug discovery are both expensive and time-intensive. To circumvent these challenges, drug repurposing or …
Zahra Ghorbanali
,
Fatemeh Zare
,
Bahram Mohammadpour
PHLA-SiNet: A novel peptide-HLA binding prediction model using heterogeneous Siamese neural networks
Predicting peptide–HLA binding is crucial for advancing immunotherapy; however, current models face several challenges, including …
Maryam Nazarloo
,
Mahsa Sa'adat
,
Fatemeh Zare
Prediction of human-virus protein-protein interaction using heterogeneous siamese neural network
Viral infections represent pathological conditions arising from the intrusion of viruses into host cells and their replication. The …
Sara Mohammadzadeh
,
Zahra Ghorbanali
,
Mohammad Amin Sohrabi
,
Fatemeh Zare
SimPep and OP-AND: A deep learning framework and curated database for predicting osteogenic peptides
Bone health is a growing concern in aging populations, and bioactive peptides in dairy products offer a promising approach to …
Maryam Ghobakhloo
,
Zahra Ghorbanali
,
Fatemeh Zare
,
Roya Abbaszadeh
,
Mohammad Taheri-Ledari
,
Bahman Zeynali
RNA Secondary Structure Prediction Using Heuristic Algorithm
RNAs play a fundamental role in many biological and medical processes and the activity of RNA is directly dependent to itsstructure. …
Fatemeh Zare
,
Nasrollah Moghadam Charkari
,
Soheila Montaseri
Molecular landscape of endometrioid Cancer: Integrating multiomics and deep learning for personalized survival prediction
Background The endometrioid subtype of endometrial cancer is a significant health concern for women, making it crucial to study the …
Behnaz Haji Molla Hoseyni
,
Hossein Lanjanian
,
Yasaman Zohrab Beigi
,
Mahdieh Salimi
,
Fatemeh Zare
,
Ali Masoudi-Nejad
HLAPepBinder: An Ensemble Model for The Prediction Of HLA-Peptide Binding
Background
Mahsa Sa'adat
,
Fatemeh Zare
,
Ali Masoudi-Nejad
,
Mohammad Farahanchi Baradaran
,
Nazanin Hosseinkhan
A novel data augmentation approach for influenza A subtype prediction based on HA proteins
Influenza, a pervasive viral respiratory illness, remains a significant global health concern. The influenza A virus, capable of …
Mohammad Amin Sohrabi
,
Fatemeh Zare
,
Saeed Shiri Ghidary
,
Mahsa Sa'adat
,
Seyed-Ali Sadegh-Zadeh
RNA-Protein interaction prediction using transformers and asymmetric Siamese neural network
RNA-protein interactions play essential roles in many biological processes, such as gene regulation and fundamental cellular processes …
Nikta Gohari Sadr
,
Armin Behjati
,
Fatemeh Zare
Exploring ceRNA networks for key biomarkers in breast cancer subtypes and immune regulation
Breast cancer is a major global health concern, and recent researches have highlighted the critical roles of non-coding RNAs in both …
Alireza Shariatmadar Taleghani
,
Yasaman Zohrab Beigi
,
Fatemeh Zare
,
Ali Masoudi-Nejad
»
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